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If you have any questions, you are always welcome to contact us. We'll get back to you as soon as possible, withing 24 hours on weekdays.
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All questions about your order, return and delivery must be sent to our customer service team by e-mail at yourstore@yourdomain.com
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The project focuses on using the capabilities of Cell processor for computing sequence alignments. In order to achieve this, existing algorithms used for sequence alignment need to be rewritten so that they could be efficiently executed on Cell processor. This process involves making use of two main features of Cell processors parallelisation and vectorisation, which ensure achieving maximum performance. Two main algorithms for sequence alignment to be analyzed in this project are NeedlemanWunsch (for global sequence alignment) and SmithWaterman (for local sequence alignment) algorithm. These algorithms are well established on regular PC platforms, but are still not widely used on Cell processors. This project will take full power of Cell processors, and put it in function of these algorithms, analyzing performance improvements and speedup.
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